Introduction
Cheesy Sausage Breakfast Muffins are the perfect make-ahead breakfast or brunch solution. These savory muffins are packed with flavorful breakfast sausage, gooey melted cheese, and fluffy eggs, all baked into a handheld, protein-rich meal. They are incredibly satisfying and convenient, making them ideal for busy mornings, school lunches, or weekend family breakfasts.
These muffins combine comfort food flavors with a high-protein punch. They are also easily customizable to suit various dietary preferences and taste profiles. Whether you are feeding a family, preparing breakfast for the week, or entertaining guests, these muffins are sure to be a hit.
Ingredients
For 12 standard muffins:
- 1 pound breakfast sausage (pork or turkey)
- 1 cup shredded cheddar cheese
- 1 cup shredded mozzarella cheese
- 6 large eggs
- 1/4 cup milk
- 1/2 cup all-purpose flour or almond flour (optional for added structure)
- 1/2 teaspoon baking powder (if using flour)
- 1/2 teaspoon salt
- 1/4 teaspoon black pepper
- 1/4 teaspoon garlic powder
- 1/4 teaspoon onion powder
- 1/4 cup finely chopped onions (optional)
- 2 tablespoons chopped parsley or green onions (optional for garnish)
Instructions
Step 1: Preheat and Prepare
- Preheat your oven to 375°F or 190°C.
- Line a 12-cup muffin tin with paper liners or grease well with nonstick cooking spray to prevent sticking.
Step 2: Cook the Sausage
- In a large skillet over medium heat, cook the breakfast sausage until browned and fully cooked, breaking it up into crumbles with a spatula.
- Drain any excess grease and set aside to cool slightly.
Step 3: Prepare the Egg Mixture
- In a large mixing bowl, crack the eggs and whisk thoroughly.
- Add the milk, salt, black pepper, garlic powder, onion powder, and optional chopped onions. Whisk until well combined.
- If using flour and baking powder, whisk them into the egg mixture at this stage for a more structured muffin.
Step 4: Assemble the Muffins
- Add the cooled sausage and both shredded cheeses into the egg mixture. Stir to combine evenly.
- Scoop the mixture into the prepared muffin cups, filling each about 3/4 full. The mixture will puff up slightly during baking.
- If desired, sprinkle a little extra cheese on top of each muffin before baking.
Step 5: Bake
- Bake in the preheated oven for 20 to 25 minutes, or until the tops are golden brown and a toothpick inserted into the center comes out clean.
- Let the muffins cool for 5 minutes in the pan before transferring them to a wire rack to cool completely.
Flavor Profile
These muffins are packed with bold and satisfying flavors. The sausage brings a savory, slightly spicy richness, while the eggs provide a soft, fluffy structure. The combination of cheddar and mozzarella cheese offers a perfect balance of sharpness and creaminess, and the mild seasonings enhance without overpowering.
The muffins are moist but hold their shape well, making them ideal for eating with your hands. You can enjoy them warm, at room temperature, or even cold straight from the fridge. When reheated, the cheese melts beautifully, making each bite indulgently gooey.
Variations
1. Vegetable Add-Ins
You can include finely chopped vegetables such as bell peppers, spinach, mushrooms, or zucchini for added nutrition and texture.
2. Spicy Version
Add chopped jalapeños, crushed red pepper flakes, or spicy sausage for a kick.
3. Low-Carb Option
Use almond flour instead of all-purpose flour, or omit the flour entirely for a keto-friendly version. The texture will be slightly softer but still delicious.
4. Different Cheeses
Try using pepper jack, Swiss, gouda, or Monterey Jack cheese depending on your preference.
5. Turkey or Chicken Sausage
For a lighter version, substitute pork sausage with lean ground turkey or chicken sausage.
6. Vegetarian Version
Omit the sausage and substitute with sautéed vegetables and additional cheese.
Serving Suggestions
Cheesy Sausage Breakfast Muffins can be served on their own or paired with:
- Fresh fruit or a smoothie for a complete breakfast
- A side of hash browns or roasted potatoes
- A dollop of sour cream or a drizzle of hot sauce
- Toast and jam on the side for a classic brunch
They are excellent for meal prepping. Simply refrigerate and reheat throughout the week.

Storage and Reheating
Refrigerator:
Store in an airtight container in the refrigerator for up to 5 days.
Freezer:
Place cooled muffins in a freezer-safe bag and freeze for up to 2 months. To reheat, microwave for 30 to 45 seconds from refrigerated or 60 to 90 seconds from frozen.
Reheat in Oven:
For best texture, reheat muffins in a preheated oven at 325°F (160°C) for about 10 minutes.
Nutrition Information (Approximate per muffin)
- Calories: 220 to 250
- Protein: 12 to 15 grams
- Carbohydrates: 2 to 5 grams (depending on flour)
- Fat: 18 to 20 grams
- Sugar: Less than 1 gram
- Fiber: 0 to 1 gram
This makes them a high-protein, low-carb breakfast choice, ideal for low-sugar or keto diets.
Tips for Best Results
- Do not overbake. Overbaking will lead to dry and rubbery muffins. Remove from oven as soon as the tops are golden and set.
- Use freshly shredded cheese if possible. Pre-shredded cheese often contains anti-caking agents that prevent melting.
- Let sausage cool before mixing into the eggs. Hot sausage can begin cooking the eggs and create lumps.
- For a more consistent texture, finely crumble or chop the cooked sausage before mixing.
- Use silicone muffin liners or well-greased metal tins to avoid sticking.
Why You Will Love This Recipe
Cheesy Sausage Breakfast Muffins offer a simple, satisfying solution to morning hunger. They combine the classic flavors of a hearty breakfast—eggs, sausage, and cheese—into a compact and mess-free format.
They are portable, customizable, and freezer-friendly, making them ideal for meal prepping. You can eat them at home, take them on the go, or pack them in lunch boxes. They also make great finger foods for brunch parties or holiday breakfasts.
Because they are made in a muffin tin, you get consistent portion sizes and perfect individual servings every time. Plus, cleanup is minimal, and the preparation takes only about 30 minutes from start to finish.
Whether you are trying to save time in the morning, stick to a high-protein diet, or simply enjoy a warm, comforting breakfast, these muffins deliver all the flavor and convenience you could want.